[project]
name = "deep-research"
version = "0.20.0"
description = "生物医药 Deep Research 系统 - Python core + skills driven research pipeline"
requires-python = ">=3.10"
readme = "README.md"
license = { text = "MIT" }
dependencies = [
    "reportlab>=4.2.0,<5.0",
    "markdown-it-py>=3.0.0",
    "matplotlib>=3.8.0",
    "Pillow>=10.0.0",
    "pandas>=2.1.0",
    "numpy>=1.26.0",
    "requests>=2.31.0",
    "httpx[socks]>=0.27.0",
    "lxml>=5.1.0",
    "biopython>=1.83",
    "python-dateutil>=2.9.0",
    "PyYAML>=6.0.1",
    "rich>=13.7.0",
    "pypdf>=6.10.2",
    "pymupdf>=1.26.0",
]

[project.optional-dependencies]
dev = [
    "pytest>=7.4.0",
    "ruff>=0.3.0",
]

# uv 兼容：装了 uv 的用户可直接 `uv sync`
[tool.uv]
package = false